| Project title | Tutor | Abstract |
|---|---|---|
| Understanding the immune system using single-cell computational approaches | Prof. Claudia Angelini Istituto per le Applicazioni del Calcolo, CNR |
📄 DOCX |
| Decoding the Functional Genome: An Integrated Genomics Platform Coupling Massively Parallel Assays with Single-Cell and Spatial Multi-Omics to Dissect Genotype-Phenotype Relationships | Prof. Davide Cacchiarelli Telethon Institute of Genetics and Medicine |
📄 DOCX |
| Decoding Regulatory Amplifications in Pediatric Cancer through Computational Multi-Omics | Prof. Mario Capasso CEINGE Biotecnologie Avanzate Franco Salvatore |
📄 DOCX |
| Genome foundation models in agriculture: Advancing plant genomics with Evo 2 | Prof. Nunzio D'Agostino Department of Agricultural Sciences, University of Naples Federico II |
📄 DOCX |
| PROMetheus: AI-designed synthetic promoters for precision gene therapy of inherited retinal disease | Prof. Diego di Bernardo Telethon Institute of Genetics and Medicine |
📄 DOCX |
| Digital twins of the human microbiome: Integrative metagenomic modeling from large-scale datasets | Prof. Edoardo Pasolli Department of Agricultural Sciences, University of Naples Federico II |
📄 DOCX |
| Integrative bioinformatics for trans-omics networks representation and image analysis | Prof. Antonio M. Rinaldi Department of Electrical Engineering and Information, University of Naples Federico II |
|
| Exploiting multiomics data in human disease model alignment | Dr. Giovanni Scala Department of Biology, University of Naples Federico II |
📄 DOCX |
| Decoding the Dark Spliceosome: A Computational and Quantitative Framework to Discover and Functionally Classify Pathogenic snRNA Variants in Rare Genetic Diseases | Prof. Marcella Cesana Department of Advanced Biomedical Sciences, University of Naples Federico II |
📄 DOCX |
| Analysis and Prediction of Challenging Genetic Variants Using Artificial Intelligence-Based Approaches | Prof. Maria Vittoria Cubellis Department of Biology, University of Naples Federico II |
📄 DOCX |
| Deciphering the Lactate-Epigenetic Axis in Cancer Chemoresistance: The Role of H3K18 Lactylation in the DNA Damage Response | Prof. Barbara Majello Department of Biology, University of Naples Federico II |
📄 DOCX |
| Chromatin-aware modelling and engineering of disorder in transcription factors | Dr. Davide Mercadante Department of Pharmacy, University of Naples Federico II |
|
| RNA Hybrid AI Platform for Structural Observables and Dynamics | Dr. Davide Mercadante Department of Pharmacy, University of Naples Federico II |
|
| A Computational and Quantitative Framework for Genome-Wide Reconstruction of Therapeutic Genome-Editing Outcomes | Dr. Gennaro Gambardella Telethon Institute of Genetics and Medicine |
📄 DOCX |
| Mechanisms of 3D chromatin restructuring in healthy and pathogenic genomes | Dr. Andrea Maria Chiariello Department of Physics, University of Naples Federico II |
📄 DOCX |
| A Multi-Omics Graph Neural Network Framework for Systematic Discovery and Drug-Oriented Validation of Synthetic Lethal Interactions in Triple-Negative Breast Cancer | Prof. Alfonso De Simone Department of Pharmacy, University of Naples Federico II |
|
| Decoding the Fusobacterium surface glycocode in colorectal cancer: structure, host recognition and function | Prof. Alba Silipo Department of Chemical Sciences, University of Naples Federico II |
📄 DOCX |
Computational and Quantitative Biology PhD
